Oktatói publikációk 2013

Oktatói publikációk 2013 Csercsik Dávid Folyóiratcikk D. Csercsik and B. Sziklai, Traffic routing oligopoly, Central European Journal of Operations Research, DOI: 10.1007/s10100-013-0316-5 IF:0.629, 2013 (*) Konferenciacikk D. Csercsik and S. Imre, Comparison of router intelligent and cooperative host intelligent algorithms in a continous model of fixed telecommunication networks Proceedings of the International Conference on Telecommunications and Network Engineering, September 12-13, Singapore, 2013 (*) D. Csercsik and G. Szederkényi, Realization Theory as a Tool for Stability Analysis for Kinetic Systems Proceedings of the 15th IASTED International Conference on Control and Applications, August 26-28, Honolulu, USA, 2013 (*) D. Csercsik and G. Szederkényi, ATP production optimization in biochemical mass action models with protein turnover Proceedings of the IFAC Workshop on Thermodynamic Foundations of Mathematical Systems Theory, July 13-16, Lyon, France, 2013 (*) Cserey György Gelencsér-Horváth Anna, Tornai Gábor János, Horváth András, Cserey György, "Fast, parallel implementation of particle filtering on the GPU architecture" Journal: EURASIP Journal on Advances in Signal Processing, DOI: 10.1186/1687-6180-2013-148 Ádám Rák, György Cserey, "Emulation of analog memristors using low yield digital switching memristors" ECCTD 2013, 21st European Conference on Circuit Theory and Design. Dinya Elek Könyv Dinya Elek: Biometria a klinikumban. Klinikai feladatok megoldása SAS Enterprise Guide használatával. Medicinia Kiadó, 2013. május, pp: 360 Könyvfejezet M Gyurkovics, Z Lohinai, A Győrfi, C Bodor, A.D. Székely, E Dinya, L Rosivall: THE ROLE OF VASCULAR ENDOTHELIAL GROWTH FACTOR (VEGF) IN THE REGULATION OF GINGIVAL VENULE DIAMETER UNDER PHYSIOLOGICAL AND PATHOLOGICAL CIRCUMSTANCES Nova Publisher, 2013

Folyóiratcikk Elek Dinya, Tamas Toth, Gergely Toth, Sandor Kabos, Gabriella Merth, Gyorgy Surjan: Mapping distribution of disease pairs in space and time, BRITISH JOURNAL OF MEDICAL & HEALTH SCIENCES 1: (7) pp.37-53., 2013 Gyurkovics M, Lohinai Z, Gyorfi A, Bodor C, Szekely AD, Dinya E, Rosivall L: Microvascular regulatory role and increased expression of vascular endothelial growth factor receptor type 2 in experimental gingivitis., JOURNAL OF PERIODONTAL RESEARCH 48: (2) pp. 194-202, 2013 Garay Barnabás M.DiMarco, M.Forti, BV.M.Garay, M.Koller, L.Pancioni, Multiple metastable rotating waves and long transients in cooperative CNN rings, In: European Conference on Circuit Theory and Design (ECCTD), Dresden, September 2013, pp. 1--4. (electronic) Gál Péter Folyóiratcikkek Gál, P., Dobó, J., Beinrohr, L., Pál, G. and Závodszky, P. (2013) Inhibition of the serine proteases of the complement system Adv. Exp. Med. Biol. 734, 23-40 IF: 1.093 Csuka, D., Munthe-Fog, L., Skjoedt, M.O., Kocsis, A., Zotter, Z., Gál, P., Varga, L., Farkas, H., Füst, G. and Garred, P. (2013) The role of ficolins and MASPs in hereditary angioedema due to C1- inhibitor deficiency Mol Immunol. 54, 271-277 IF: 2.897 *Megyeri, M., Harmat, V., Major, B., Végh, A., Balczer, J., Héja, D., Szilágyi, K., Datz, D., Pál, G., Závodszky, P., Gál, P. and Dobó J. (2013) Quantitative characterization of the activation steps of mannan-binding lectin (MBL)-associated serine proteases (MASPs) points to the central role of MASP-1 in the initiation of complement lectin pathway. J. Biol. Chem. 288, 8922-8934 IF: 4.773 Paréj, K., Dobó, J., Závodszky, P. and Gál, P. (2013) The control of the complement lectin pathway activation revisited: Both C1-inhibitor and antithrombin are likely physiological inhibitors, while α 2 - macroglobulin is not Mol Immunol. 54, 415-422 IF: 2.897

Venkatraman Girija, U., Gingras, A.R., Marshall, J.E., Panchal, R., Sheikh, M.A., Gál, P., Schwaeble, W.J., Mitchell, D.A., Moody, P.C. and Wallis, R. (2013) Structural basis of the C1q/C1s interaction and its central role in assembly of the C1 complex of complement activation. Proc. Natl. Acad. Sci. USA, 110, 13916-13920 IF: 9.681 Gáspári Zoltán Folyóiratcikkek Annamária F Ángyán, Zoltán Gáspári: Ensemble-based interpretations of NMR structural data to describe protein internal dynamics. Molecules 2013, 18(9), 10548-10567 (review) Gyöngy Miklós Folyóiratcikk "Histology-Based Simulations of Ultrasound Imaging: Methodology", M Gyöngy, L Balogh, K Szalai, I Kalló, Ultrasound in medicine & biology 39 (10), 1925-1929, 2013 Nemzetközi konferencia kiadvány "Passive acoustic mapping using optimal beamforming for real-time monitoring of ultrasound therapy", C Coviello, RJ Kozick, JJ Choi, M Gyöngy, J Collin, C Jensen, PP Smith, CC Coussios, Proceedings of Meetings on Acoustics 19, 075024, 2013 Nemzetközi konferencia kiadvány "Characterization of cavitation based on autocorrelation of acoustic emissions", M Gyöngy, C Jensen Proceedings of Meetings on Acoustics 12 (1), 075001-075001-11, 2013 Horváth András Folyóiratcikk Andras Horvath, Miklos Rasonyi, Topographic implementation of particle filters on cellular processor arrays Journal of Signal Processing (Elsevier) Volume 93 Issue 7, July, 2013 Pages 1853-1863 Anna Gelencsér-Horváth, Gábor János Tornai, András Horváth, György Cserey Fast, parallel implementation of particle filtering on the GPU architecture EURASIP Journal on Advances in Signal Processing Nemzetközi konferencia publikáció Andras Horvath, Attila Stubendek, Tamas Roska One dimensional cellular array of in-plane spin torque oscillators The 13th IEEE International Conference on Nanotechnology 2013, China Beijing

Detection of Spatial-Temporal Events with Delayed CNN Templates Andras Horvath and Tamas Roska International Symposium on Nonlinear Theory and its Applications 2013, Santa Fe Fernando Corinto, Andras Horvath, Tamas Roska Architectures for Nanoscale Hybrid Computing Systems 21st European Conference on Circuit Theory and Design Miklos Koller, Andras Horvath, Tamas Roska Frameless computing for spatial-temporal events 21st European Conference on Circuit Theory and Design Kalló Imre Zhou S, Holmes MM, Forger NG, Goldman BD, Lovern MB, Caraty A, Kalló I, Faulkes CG, Coen CW, Socially regulated reproductive development: Analysis of GnRH-1 and kisspeptin neuronal systems in cooperatively breeding naked mole-rats (Heterocephalus glaber), JOURNAL OF COMPARATIVE NEUROLOGY 521:(13) pp. 3003-3029. (2013) Kallo I, Vida B, Bardoczi Z, Szilvasy-Szabo A, Rabi F, Molnar T, Farkas I, Caraty A, Mikkelsen J, Coen CW, Hrabovszky E, Liposits Z, Gonadotropin-Releasing Hormone Neurones Innervate Kisspeptin Neurones in the Female Mouse Brain., NEUROENDOCRINOLOGY 98:(4) pp. 281-289. (2013) Gyongy M, Balogh L, Szalai K, Kallo I, Histology-based simulations of ultrasound imaging: methodology. ULTRASOUND IN MEDICINE AND BIOLOGY 39:(10) pp. 1925-1929. (2013) Kolumbán Géza Könyvfejezet author = G. Kolumbán, T. Krébesz, C. K. Tse and F. C. M. Lau editor = M. Eisencraft, R. Attux and R. Suyama booktitle = Chaotic Signals in Digital Communications chaptertitle = "Basics of Communications Using Chaos" publisher = CRC Press, Taylor & Francis Group year = 2013, pages = 121-155 Konyvfejezet a booktitle cimu konyvben. Nemzetközi konferencia kiadványok author = T. Krébesz, G. Kolumbán, F. C. M. Lau and C. K. Tse title = "From simulations to field tests: PXI-based software defined wireless platform for performance evaluation of FM-DCSK" booktitle = Proc. IEEE-MWSCAS'13 pages = 1267-1270 year = 2013 address = Columbus, OH, USA month = Aug 4-7

author = Cs. M. Józsa, G. Kolumbán, A. M. Vidal, F. M. Zaldívar and A. González title = "New Parallel Sphere Detector Algorithm Providing High-Throughput for Optimal {MIMO} Detection" booktitle = Procedia Computer Science volume = 18 publisher = Elsevier pages = 2432-2435 year = 2013 address = Barcelona, Spain month = June 5-7 author = G. Kolumbán, T. Krébesz, F. C. M. Lau and C. K. Tse title = "Turn Your Baseband Matlab Simulator into a Fully Functional, 2.4-GHz, Operating FM- DCSK Transceiver Using SDE Platform" booktitle = Proc. ECCTD'13 address = Dresden, Germany year = 2013 month = September 8-12 pages = 4 pages author = T. Krébesz, G. Kolumbán, F. C. M. Lau and C. K. Tse title = "Application of Universal Software Defined PXI Platform for the Performance Evaluation of FM-DCSK Communications System" booktitle = Proc. ECCTD'13 address = Dresden, Germany year = 2013 month = September 8-12 pages = 4 pages Kovács Ferenc F. Kovács, G. Fodor, G. Hosszú: A Proposed Novel Method for CHD Screening by Fetal Heart Murmur Detection using Phonocardiography, Int. Conf. EFMI Data and Knowledge for Medical Decision Support, Prague, 2013, p. 31-34. Kovács Ferenc: Intelligens érzékelők az orvosbiológiában, Monográfia, Szak Kiadó, 2013, ISBN 978-963-9863-31-6, 470. old. P. Hedüs, M. Orosz, G.Hosszú, F. Kovács: Multicast Over Location-Based Services. Chapter in book, Geographic Information Systems: Concepts, Methodologies, Tools and Applications, Hershey, USA, 2013, Ch. 36, pp. 609-615, ISBN 10-1466620-38-2 Liposits Zsolt Saját közlemények száma: 5 Összesített impakt : 14,727

Folyóiratcikk Afferent neuronal control of type-i gonadotropin releasing hormone neurons in the human understanding the regulation of the human menstrual cycle represents Erik Hrabovszky and Zsolt Liposits Frontiers in Endocrinology Ghrelin decreases firing activity of gonadotropin-releasing hormone-1 (GnRH1) neuron sin an estrous cycle and endocannabinoid signaling dependent manner Imre Farkas, Csaba Vastagh, Miklós Sárvári, Zsolt Liposits PlosOne IF: 3,73 Substance P Immunoreactivity Exhibits Frequent Colocalization with Kisspeptin and Neurokinin B in the Human Infundibular Region Erik Hrabovszky1*, Beáta Á. Borsay1,2, Kálmán Rácz2, László Herczeg2, Philippe Ciofi3, Stephen R. Bloom4, Mohammad A. Ghatei4, Waljit S. Dhillo4, Zsolt Liposits1,5 PlosOne IF: 3,73 Orexinergic input to dopaminergic neurons of the human ventral tegmental area Erik Hrabovszky, Csilla S. Molnár, Beáta Á. Borsay, Péter Gergely, László Herczeg, Zsolt Liposits PlosOne IF: 3,73 Gonadotropin-releasing hormone neurones innervate 1 kisspeptin neurones in the female mouse brain. Imre Kalló; Barbara Vida; Zsuzsanna Bardóczi; Anett Szilvásy- Szabó; Fruzsina Rabi; Tamás Molnár; Imre Farkas; Alain Caraty; Jens Mikkelsen; Clive W. Coen; Erik Hrabovszky and Zsolt Liposits Neuroendocrinology IF: 3,537 Nemzetközi Konferencia Society for Neuroscience 2013 Absztrakt Morphological evidence for direct glycinergic input to cholinergic neurons in the mouse basal forebrain Zsuzsanna Bardóczi, Masahiko Watanabe, László Záborszky, Zsolt Liposits and Imre Kalló

Mátyus Péter Kertész Sz., Szabó G., Udvari Sz., Lévay Gy., Mátyus P., Hársing L.G.Jr.: Temporal alteration of spreading depression by the glycine transporter type-1 inhibitors NFPS and Org-24461 in the chicken retina. Brain Res., 1492, 1-6 (2013). IF 2.879 (2012) Arany Á., Bolgár B., Balogh B., Antal P., Mátyus P.: Multi-aspect candidates for repositioning: Data fusion methods using heterogeneous information sources. Curr. Med. Chem, 20, 95-107 (2013). PPKE IF 4.070 (2012) Tábi T., Szökő É., Mérey A., Tóth V., Mátyus P., Gyires K.: Study on SSAO enzyme activity and anti-inflammatory effect of SSAO inhibitors in animal model of inflammation. J. Neural Transm., 120, 963-967 (2013). IF 3.052 (2012) Énzsöly A., Markó K., Tábi T., Szökő É., Zelkó R., Tóth M., Mátyus P., Petrash J.M., Németh J.: Lack of association between VAP-1/SSAO activity and corneal neovascularization in a rabbit model. J. Neural Transm., 120, 969-975 (2013). IF 3.052 (2012) Ilić M., Dunkel P., Ilaš J., Chabielska E., Zakrzeska A., Mátyus P., Kikelj D.: Towards dual antithrombotic compounds - Balancing thrombin inhibitory and fibrinogen GPIIb/IIIa binding inhibitory activities of 2,3-dihydro-1,4-benzodioxine derivatives through regio- and stereoisomerism. Eur. J. Med. Chem.,62, 329-340 (2013). IF 3.499 (2012) Hársing L.G.Jr., Mátyus P.: Mechanism of glycine release, which build up synaptic and extrasynaptic glycine levels: The role of synaptic and non-synaptic glycine transporters. Brain Res. Bull., 93, 110-119 (2013). PPKE IF 2.935 (2012) Zádori S.Z., Fehér Á., Al-Khrasani M., Lackó E., Tóht E.V., Brancati S.B., Mátyus P., Gyires K.: Imidazoline versus alpha2-adrenoceptors in the control of gastric motility in mice. Eur. J. Pharmacol., 705, 61-67 (2013). IF 2.592 (2012) Kósa P.J., Horváth P., Wölfling J., Kovács D., Balla B., Mátyus P., Horváth E., Speer G., Takács I., Nagy Zs., Horváth H., Lakatos P.: CYP24A1 inhibition facilitates the anti-tumor effect of vitamin D3 on colorectal cancer cells.

World J. Gastroenterol, 19, 2621-2628 (2013). IF 2.547 (2012) Bolgár B., Arany Á., Temesi G., Balogh B., Antal P., Mátyus P.: Drug repositioning for treatment of movement disorders: from serendipity to rational discovery strategies. Curr. Top. Med. Chem., in press (2013). PPKE IF 3.702 (2012) Balogh B., Kurucz Istvan, Pázmány T., Falus A., Mátyus P.: Analysis of LPA receptor ligand interactions. Chem. Biol. Drug. Des., submitted (2013). IF 2.469 (2012) Temesi G., Bolgár B., Arany Á., Szalai Cs., Antal P., Mátyus P.: Early repositioning through compound set enrichment analysis: A knowledge recycling strategy. Future Med. Chem., submitted (2013). PPKE IF 3.310 (2012) Németh János Folyóiratcikk 1. Marsovszky L., Resch M., NémethJ., Toldi G., Medgyesi E., Kovács L., Balog A.: In vivo confocal microscopic evaluation of corneal Langerhans cell density and distribution and evaluation of dry eye in rheumatoid arthritis. Innate Immun. 2013;19(4):348-54. Epub ahead of print 2012 Nov 30. IF 2012 : 2.682 2. Füst Á., Csuka D., Süveges I., Imre L., Bausz M., Nagymihály A., Csorvási Á., Füst Gy., Németh J.: Complement activation in the aqueous humor of pseudophakic bullous keratopathy patients. Ophthalmic Res. 2013;49(3):161-6. Epub 2012 Dec 20. IF 2012 : 1.562 3. Chang K-C; LaBarbera D; Ponder J; Laffin B; Énzsöly A, Németh J, Petrash M: Beta-glucogallin reduces the expression of lipopolysaccharide-induced inflammatory markers by aldose reductase inhibition in murine macrophages and ocular tissues. Chem Biol Interact. 2013 Feb 25;202(1-3):283-7. Epub 2012 Dec 15. IF 2012 : 2.967 4. Énzsöly A, Markó K, Tábi T, Szökő E, Zelkó R, Tóth M, Mark Petrash J, Mátyus P, Németh J.: Lack of association between VAP-1/SSAO activity and corneal neovascularization in a rabbit model. J Neural Transm. 2013 Jun;120(6):969-75. Epub 2013 Feb 9. IF 2012 : 3.052 5. Maka E, Lukats O, Vizkelety T, Markella Z, Kis M, Németh J, Barabas J.: Measurements of orbital volume using cone-beam computed tomography in eye movement abnormalities. Eur J Ophthalmol. 2013 May 3:0. doi: 10.5301/ejo.5000303. [Epub ahead of print] IF 2012 : 0.912 6. Marsovszky L, Németh J, Resch MD, Toldi G, Legány N, Kovács L, Balog A: Corneal Langerhans cell and dry eye examinations in ankylosing spondylitis. Innate Immun. 2013 Aug 19. Epub ahead of print (PMID: 23960273) IF 2012 : 2.682 7. Kusnyerik Á, Wilke R, Klose U, Boda K, Németh J, Süveges I, Zrenner E: Magnetic resonance Imaging vs. ultrasound biometry in the equatorial plane in human eyes. Acta Ophthalmologica - 01/2009; 87:0-0. DOI:10.1111/j.1755-3768.2009.201.x IF 2011 : 2.345

8. Banko EM, Kortvelyes J, Nemeth J, Weiss B, Vidnyanszky Z: Amblyopic deficits in the timing and strength of visual cortical responses to faces CORTEX 49:(4) pp. 1013-1024. (2013) IF 2012 :6,161 9. Kiss E, Dohán J, Németh J, Poór G.: Egy ritkán felismert ritka betegség: a Behcet-kór. Orv Hetil. 2013 Jan 20;154(3):93-101. 10. Fodor E., Györffy H., Tóth J., Bausz M., Resch M., Lukáts O., Németh J.: Szövettani vizsgálatok conjunctivochalasisban - Esetsorozat. Szemészet 150: 62-66, 2013. 11. Németh J., Nagy Z.Zs.: A Mária utcai Szemészeti Klinika felújításának történeti előzményei. Szemészet 150: 85-88, 2013. 12. Kiss H., Németh J.: A vakság okai Magyarországon. Szemészet 150; 21-28, 2013. 13. Németh J.: Az intravitrealis aflibercept alkalmazása az időskori macula degeneráció kezelésében. Szemészet 150:(1) pp. 24-27. (2013) 14. Lukács R, Resch M, Kiss H, Bartha Á, Borbándy Á, Szabó A, Papp A, Németh J: Szürkehályogműtét időskori macula degeneráció miatt intravitreális ranibizumab injekcióval kezelt betegeken. Szemészet 150:(1) pp. 19-23. (2013) Könyv 15. Németh J., Nagy Z.Zs. (szerk.): Emlékkönyv a Szemészet folyóirat alapításának 150. évfordulójára. Magyar Szemorvostársaság, Budapest, 2013. Prószéky Gábor Könyvfejezet Prószéky, Gábor (2013) How Truly Electronic Dictionaries of the 21st Century Should Look Like? In: Gerhard Stickel, Tamás Váradi (eds.) Lexical Challenges in a Multilingual Europe. (Duisburg Papers on Research in Language and Culture, Vol. 99.) Frankfurt: Peter Lang. 51-60. Prószéky Gábor (2013) Eltűntek az adathordozók. In: Veszelszki Ágnes (szerk.) A világhálóba keveredett ember. Budapest: ELTE Eötvös Kiadó (megjelenés alatt) Folyóiratcikk Prószéky Gábor, Miháltz Márton, Kuti Judit (2013) Lexikális szemantika: a számítógépes nyelvészet és a pszicholingvisztika határán. In: Pléh Csaba (szerk.) Általános Nyelvészeti Tanulmányok XXV. Budapest: Akadémiai. pp. 141-170. Konferenciacikk Orosz György; Novák Attila; Prószéky Gábor (2013) Magyar nyelvű klinikai rekordok morfológiai egyértelműsítése. In: Tanács Attila; Vincze Veronika (szerk.) IX. Magyar Számítógépes Nyelvészeti Konferencia. Szeged: Szegedi Tudományegyetem Informatikai Tanszékcsoport, pp. 159-169.

Siklósi Borbála; Novák Attila; Prószéky Gábor (2013) Helyesírási hibák automatikus javítása orvosi szövegekben a szövegkörnyezet figyelembevételével. In: Tanács Attila; Vincze Veronika (szerk.) IX. Magyar Számítógépes Nyelvészeti Konferencia. Szeged: Szegedi Tudományegyetem Informatikai Tanszékcsoport, pp. 148-158. Szederkényi Gábor Könyvfejezet Gábor, A.; Hangos, K. M. & Szederkényi, G. Gupta, A. & Henzinger, T. A. (Eds.) On the Verification and Correction of Large-Scale Kinetic Models in Systems Biology Springer, 2013, Lecture Notes in Computer Science 8130, 206-219 Referált nemzetközi folyóiratcikk Csercsik, D. & Imre, S. (2013), 'Comparison of router intelligent and cooperative host intelligent algorithms in a continuous model of fixed telecommunication networks', International Journal of Communication Engineering 7(9), 333-340. ISSN: 0988-0341E Hannemann-Tamás, R.; Gábor, A.; Szederkényi, G. & K.M., H. (2013), 'Model complexity reduction of chemical reaction networks using mixed-integer quadratic computing', Computers and Mathematics with Applications 65, 1575-1595. ISSN: 0898-1221 Johnston, M. D.; Siegel, D. & Szederkényi, G. (2013), 'Computing weakly reversible linearly conjugate chemical reaction networks with minimal deficiency', Mathematical Biosciences 241, 88-98. ISSN: 0025-5564 Tuza, Z. A.; Szederkényi, G.; Hangos, K. M.; Alonso, A. A. & Banga, J. R. (2013), 'Computing all sparse kinetic structures for a Lorenz system using optimization', International Journal of Bifurcation and Chaos 23, 1350141-1--1350141--17. ISSN: 0218-1274 Veres, J.; Cserey, G. & Szederkényi, G. (2013), 'Bio-inspired backlash reduction of a low-cost robotic joint using closed-loop-commutated stepper motors', Robotica 31, 789-796. ISSN: 0263-5747 Referált nemzetközi konferenciacikk Szederkényi, G.; Lipták, G.; Rudan, J. & Hangos, K. Optimization-based design of kinetic feedbacks for nonnegative polynomial systems. IEEE 9th International Conference of Computational Cybernetics, July 8-10, Tihany, Hungary, 2013, 67-72 DOI: 10.1109/ICCCyb.2013.6617563 ISBN: 978-1-4799-0063-3 Csercsik, D. & Szederkényi, G. (2013), 'ATP production optimization in biochemical mass action models with protein turnover', in B. E. Ydstie; B. Maschke & D. Dochain, ed., 'IFAC Workshop on Thermodynamic Foundations of Mathematical Systems Theory, July 13-16, Lyon, France', ISBN: 978-3-902823-40-3, 42-47. DOI: 10.3182/20130714-3-FR-4040.00017 János Rudan, Gábor Szederkényi and Katalin M. Hangos. Computing dynamically equivalent realizations of biochemical reaction networks with mass conservation.

AIP Conference Proceedings 1558, 2356-2359 (2013), ICNAAM 2013, 21 27 September 2013, Rhodes, Greece ISBN: 978-0-7354-1184-5 DOI: 10.1063/1.4826014 Eszter Lakatos, Domokos Meszéna, and Gábor Szederkényi. Identifiablity Analysis and Improved Parameter Estimation of a Human Blood Glucose Control System Model. 11th International Conference on Computational Methods in Systems Biology - CMSB 2013, Klosterneuburg, Austria, 22-24 September, 2013. A. Gupta and T.A. Henzinger (Eds.): CMSB 2013, Lecture Notes in Computer Science, LNBI 8130, pp. 248 249, Springer ISBN: 978-3-642-40707-9 Csercsik, D. & Szederkényi, G. (2013), 'Realization theory as a tool of stability analysis for kinetic systems''proc. of the IASTED International Conference Control and Applications (CA 2013), August 26-28, Honolulu, USA'. 805.071 Hangos, K. & Szederkényi, G. (2013), 'The effect of conservation on the dynamics of chemical reaction networks', in B. E. Ydstie; B. Maschke & D. Dochain, ed., 'IFAC Workshop on Thermodynamic Foundations of Mathematical Systems Theory, July 13-16, Lyon, France', ISBN: 978-3-902823-40-3, 30-35. Hangos, K. M.; Szederkényi, G. & Alonso, A. A. (2013), 'Reaction kinetic form of lumped process system models', in B. E. Ydstie; B. Maschke & D. Dochain, ed., 'IFAC Workshop on Thermodynamic Foundations of Mathematical Systems Theory, July 13-16, Lyon, France', ISBN: 978-3-902823-40-3, 48-53. Magyar, A.; Hangos, K. & Szederkényi, G. (2013), 'Stabilizing dynamic feedback design of quasipolynomial systems using their underlying reduced linear dynamics''52nd IEEE Conference on Decision and Control (CDC 2013), Dec. 10-13, Florence'. Rudan, J.; Kersbergen, B.; van den Boom, T. & Hangos, K. (2013), 'Performance analysis of MILP based model predictive control algorithms for dynamic railway scheduling''european Control Conference (ECC2013), Juli 17-19 2013, Zurich', 4562-4567. ISBN: 978-3-952-41734-8 Rudan, J.; Szederkényi, G. & Hangos, K. M. (2013), 'Computing dynamically equivalent realizations of biochemical reaction networks with mass conservation''aip Conference Proceedings, ICNAAM 2013: 11th International Conference of Numerical Analysis and Applied Mathematics, 21 27 September, Rhodes, Greece', ISBN: 978-0-7354-1184-5, 2356-2359. Tuza, Z. A.; Singhal, V.; Kim, J. & Murray, R. M. An In Silico Modeling Toolbox for Rapid Prototyping of Circuits in a Biomolecular Breadboard System 52nd IEEE Conference on Decision and Control (CDC 2013), Dec. 10-13, Florence, 2013 Szirányi Tamás Folyóirat A. Kovács, T.Szirányi: "Improved Harris feature point set for orientation sensitive urban area detection in aerial images", IEEE Geoscience and Remote Sensing Letters, V.10(4), pp. 796-800, 2013 Á. Kiss, T. Szirányi: "Localizing People in Multi-view Environment using Height Map Reconstruction in Real-Time", Pattern Recognition Letters, in press, 2013

A. Keszler, T. Szirányi Tamás, Zs. Tuza: "Dense subgraph mining with a mixed graph model", Pattern Recognition Letters, V.34(11), pp. 1252-1262, 2013 Konferencia Á. Kiss, T. Szirányi: "Evaluation of Manually Created Ground Truth for Multi-view People Localization, International Workshop on Video and Image Ground Truth for computer vision Applications: VIGTA 2013, St. Petersburg, ACM, 2013 Cs. Benedek, Zs. Janko, Cs. Horvath, D. Molnár, D. Chetverikov, T. Szirányi: "An Integrated 4D Vision and Visualisation System", International Conference on Computer Vision Systems", Lecture Notes in Computer Science, Vol. 7963, Springer Verlag, P#27, 2013 Á. Kiss, T. Szirányi: "Multi-view people detection on arbitrary ground in real-time", International Conference on Computer Vision Theory and Applications: VISAPP, Barcelona, LNCS, Springer, pp. 675-680, 2013 T. Szirányi, M. Shadaydeh: "Improved segmentation of a series of remote sensing images by using a fusion MRF model", International Workshop on Content-Based Multimedia Indexing, CBMI 2013, Veszprém, P#43, 2013 A. Kovács, T. Szirányi: "Multidirectional building detection in aerial images without shape templates", ISPRS Hannover Workshop 2013: High-Resolution Earth Imaging for Geospatial Information, Hannover, P# H-WS2013-81, 2013 Szolgay Péter Book chapter Journal Papers Z. Nagy, C.Nemes, A.Hiba, Á Csík, A.Kiss, M.Ruszinkó and P. Szolgay, Accelerating unstructured finite volume computations on fieldprogrammable gate arrays, Concurrency and Computation:Practice and Experience, 2013. DOI:10.1002/cpe.3022 C.Nemes, G.Barcza, Z.Nagy, Ö. Legeza and P.Szolgay, The density matrix renormalization groupalgorithm on kilo-processor architectures:implementation and trade-offs,computer Pysics Communications, 2013, under review Conference Papers C.Nemes, G.Barcza, Z.Nagy, Ö. Legeza and P.Szolgay, Implementation trade-offs of the density matrix renormalization group algorithm on kilo-processor architectures, Proc. of ECCTD, pp.100-104, 2013 Dresden

B.J.Borbély, P.Szolgay, Z. Kincses, Zs.Vörösházi, Analysis of myoelectric signals using a Field Programmable SoC, Proc. of ECCTD, pp.105-109, 2013 Dresden B.J.Borbély, P.Szolgay, Estimating wrist flexion angle from multi-channel surface EMG of forearm muscles, Proc. of BICAS, 2013 Rotterdam N Sárkány, Gy. Cserey, P.Szolgay, An introduction of the Biomimetic hand testbed: Skeletal structure and actuation, Proc. of ROSE, 2013 Washington DC Conference Presentations P. Szolgay, Some problems on Mega Core Architectures Bionics at the crossroad of Biotechnology and Information Technology, Torino, 2013 A. Kiss, P. Szolgay, Prototype virtual Architectures in FPGA implementations Bionics at the crossroad of Biotechnology and Information Technology, Budapest, 2013 Tóth Sára Folyóiratcikk Antitumoral effects of 9-cis retinoic acid in adrenocortical cancer. Szabó DR, Baghy K, Szabó PM, Zsippai A, Marczell I, Nagy Z, Varga V, Eder K, Tóth S, Buzás EI, Falus A, Kovalszky I, Patócs A, Rácz K, Igaz P. Cell Mol Life Sci. 2013 Jun 27. IF: 5,615 Tőkés Szabolcs Folyóiratcikk In-line hologram segmentation for volumetric samples László Orzó, 1,* Zoltán Göröcs, 1 András Fehér, 1 and Szabolcs Tőkés 1,2 1 Cellular Sensory and Wave Computing Laboratory, Computer and Automation Research Institute, Hungarian Academy of Sciences, Budapest H-1111, Hungary 2 Faculty of Information Technology, Pázmány Péter Catholic University, Budapest H-1083, Hungary Applied Optics, Vol. 52, Issue 1, pp. A45-A55 (2013) http://dx.doi.org/10.1364/ao.52.000a45 Color Digital Holographic Microscopes for Monitoring Waterborne Microorganisms Sz. Tokes1;2L. Orzo1, M. Kiss1, B. Wittner1 1 MTA SZTAKI, Cellular Sensory and Optical Wave Computing Laboratory, H-1111 Budapest, Hungary, email: tokes.szabolcs@sztaki.mta.hu 2 Faculty of Information Technology, Pazmany Peter Catholic University, H-1083 Budapest, Hungary.

Proceedings of 3rd EOS Topical Meeting on Blue Photonics - Optics in the Sea, Blue Photonics 3, Den Hoorn, Texel, Netherlands, 18-20 March 2013 Ulbert István Folyóiratcikkek Márton G, Fekete Z, Fiáth R, Baracskay P, Ulbert I, Juhász G, Battistig G, Pongrácz A In vivo measurements with robust silicon-based multielectrode arrays with extreme shaft lengths. IEEE Sensors Journal: 2013 Apr; 13(9): 3263-3269. Dombovári B, Fiáth R, Kerekes BP, Tóth E, Wittner L, Horváth D, Seidl K, Herwik S, Torfs T, Paul O, Ruther P, Neves HP, Ulbert I In vivo validation of the electronic depth control probes. Biomedical Engineering/Biomedizinische Technik: 2013 Oct;1-7. (Epub ahead of print) ISSN (Online) 1862-278X, ISSN (Print) 0013-5585 Hajos N, Karlocai MR, Nemeth B, Ulbert I, Monyer H, Szabo G, Erdelyi F, Freund TF, Gulyas AI Input-Output Features of Anatomically Identified CA3 Neurons during Hippocampal Sharp Wave/Ripple Oscillation In Vitro. JOURNAL OF NEUROSCIENCE 33:(28) pp. 11677-11691. (2013) doi: 10.1523/JNEUROSCI.5729-12.2013 Poszterek Fiáth R, Karmos G, Horváth D, Kerekes BP, Aarts AA, Ruther P, Neves HP, Acsády L, Ulbert I. Investigation of the thalamocortical slow oscillation in the anesthetized rat with high channel count electronic depth control probes. Magyar Idegtudományi Társaság XIV. Konferenciája, 2013. január 17-19., Budapest, Magyarország Beregszászi P, Fiáth R, Acsády L, Ulbert I. Characterization of single-unit activity recorded with high channel count electronic depth control probes in different thalamic nuclei of the anesthetized rat. Magyar Idegtudományi Társaság XIV. Konferenciája, 2013. január 17-19., Budapest, Magyarország

Horváth D, Fiáth R, Wittner L, Ulbert I, Karmos G. Characteristics of auditory cortical evoked responses elicited by acoustic and thalamic electrical stimulation in the cat. Magyar Idegtudományi Társaság XIV. Konferenciája, 2013. január 17-19., Budapest, Magyarország Kékesi O, Nyitrai G, Szabó P, Fiáth R, Ulbert I, Kardos J, Héja L Astrocytes compensate neuronal and glial overexcitation. Magyar Idegtudományi Társaság XIV. Konferenciája, 2013. január 17-19., Budapest, Magyarország Fiáth R, Beregszászi P, Karmos G, Horváth D, Kerekes BP, Aarts AA, Ruther P, Neves HP, Acsády L, Ulbert I. Spatiotemporal dynamics of the slow oscillation in the cortex and thalamus of the anesthetized rat. V. Dubrovnik Conference on Cognitive Science, 2013 május 16-19., Dubrovnik, Horvátország Vida Barbara Folyóiratcikk Gonadotropin-releasing hormone neurones innervate kisspeptin neurones in the female mouse brain. Kalló I, Vida B, Bardóczi Z, Szilvásy-Szabó A, Rabi F, Molnár T, Farkas I, Caraty A, Mikkelsen J, Coen CW, Hrabovszky E, Liposits Z. Neuroendocrinology. 2013 Sep 21. Konferencia-kiadványok Glycinergic input to neurons of the mouse basal forebrain, MITT 2013 P4.2.; ISBN 978-963- 88224-2-0 Zsuzsanna Bardóczi, Barbara Vida, Masahiko Watanabe, László Záborszky, Zsolt Liposits, Imre Kalló Projections of the hypothalamic paraventricular region to the ventral tegmental area in the rat: the integration of neuroendocrine and reward signals, MITT 2013 P4.16.; ISBN 978-963- 88224-2-0 Imre Kalló, Erik Hrabovszky, Csilla S. Molnár, Barbara Vida, Csaba Fekete, Zsolt Liposits

Morphological evidence for direct interaction between glycine transporter immunoreactive cells and GnRH neurons in the mouse brain, ENDO2013 (Endocr Rev, Vol. 34 (03_MeetingAbstracts): SAT-142) Zsuzsa Bardóczi, Barbara Vida, Masahiko Watanabe and Imre Kalló Závodszky Péter Folyóiratcikkek Gráczer É, Lionne C, Závodszky P, Chaloin L and Vas M (2013) Transient kinetic studies reveal isomerization steps along the kinetic pathway of Thermus thermophilus 3-isopropylmalate dehydrogenase. FEBS J 280, 1764-72 Paréj K, Dobó J, Závodszky P and Gál P (2013) The control of the complement lectin pathway activation revisited: Both C1-inhibitor and antithrombin are likely physiological inhibitors, while α(2)- macroglobulin is not. Mol Immunol 54, 415-422 Varga A, Gráczer E, Chaloin L, Liliom K, Závodszky P, Lionne C and Vas M (2013) Selectivity of kinases on the activation of tenofovir, an anti-hiv agent. Eur J Pharm Sci 48, 307-15 Megyeri M, Harmat V, Major B, Végh Á, Balczer J, Héja D, Szilágyi K, Datz D, Pál G, Závodszky P, Gál P and Dobó J (2013) Quantitative characterization of the activation steps of mannan-binding lectin (MBL)-associated serine proteases (MASPs) points to the central role of MASP-1 in the initiation of the complement lectin pathway. J Biol Chem 288, 8922-34 Závodszky P (2013) [23738340] Péter Friedrich (1936-2013). FEBS Lett 587, 1269-70 Gál P, Dobó J, Beinrohr L, Pál G and Závodszky P (2013) [23402017] Inhibition of the serine proteases of the complement system. Adv Exp Med Biol 735, 23-40 Závodszky P and Hajdú I (2013) [23348674] Evolution of the concept of conformational dynamics of enzyme functions over half of a century: A personal view. Biopolymers 99, 263-9